Aspergillus oryzae RIB 40 Genome DB

AO080513000034

 gene name
  
 product   Predicted protein
 CDS
  430 amino acids,   molecular mass 49539 Da show
  1293 nucleotides show
  with 2000-b promoter, 1000-b terminator region and intorn
 show
 contig
  SC006 complement(join(86132..87375, 88604..88652)) genbank
 Dogan ID
  AO090038000383 puf family RNA-binding protein [Aspergillus oryzae Ace36] alignment
 paralogs  none

 motif
 IPR013891 Protein of unknown function DUF1766
 detail
 localization
  43.5 %: nuclear
  26.1 %: mitochondrial
  8.7 %: cytoplasmic
  4.3 %: vesicles of secretory system
  4.3 %: extracellular, including cell wall
  4.3 %: Golgi
  4.3 %: peroxisomal
  4.3 %: plasma membrane
 		detail
 homologs  
  1
 AO090038000383 puf family RNA-binding protein [Aspergillus oryzae Ace36] Expect = 0.75563
 alignment
  2
 ref|XP_001394485.1| hypothetical protein An11g04935 [Aspergillus niger] >gnl|BL_ORD_ID|8966 hypotheical protein [Aspergillus niger] Expect = 2.8E-36
  3
 ref|XP_746415.1| hypothetical protein AFUA_4G00410 [Aspergillus fumigatus Af293] >gnl|BL_ORD_ID|167 hypothetical protein AFUA_4G00410 [Aspergillus fumigatus Af293] Expect = 3.1E-33
  4
 ref|XP_001275471.1| transcriptional corepressor Cyc8, putative [Aspergillus clavatus NRRL 1] >gnl|B_ORD_ID|5941 transcriptional corepressor Cyc8, putative [Aspergillus clavatus NRRL 1] Expect = 0.04480
  5
 ref|XP_001215135.1| predicted protein [Aspergillus terreus NIH2624] >gnl|BL_ORD_ID|4958 predicted potein [Aspergillus terreus NIH2624] Expect = 6.2E-32
  6
 ref|XP_659726.1| hypothetical protein AN2122.2 [Aspergillus nidulans FGSC A4] >gnl|BL_ORD_ID|4143 hpothetical protein AN2122.2 [Aspergillus nidulans FGSC A4] Expect = 3.0E-39
  7
 ref|XP_960464.1| hypothetical protein [Neurospora crassa OR74A] >gnl|BL_ORD_ID|4051 predicted proten [Neurospora crassa] Expect = 0.00128
  8
 ref|XP_370284.1| hypothetical protein MGG_06781 [Magnaporthe grisea 70-15] >gnl|BL_ORD_ID|2465 hypohetical protein MGG_06781 [Magnaporthe grisea 70-15] Expect = 0.21905
  9
 ref|NP_594967.1| hypothetical protein SPAC3G6.01 [Schizosaccharomyces pombe 972h-] >gnl|BL_ORD_ID|320 Chromodomain helicase hrp3 (ATP-dependent helicase hrp3) >gnl|BL_ORD_ID|3320 SPAC3G6.01 [Schizosacharomyces pombe] Expect = 0.08386
  10
 ref|NP_014860.1| Rfc1p [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|6518 Replication factor C subunit (Replication factor C1) (Activator 1 95 kDa subunit) (Cell division control protein 44) >gnl|BL_ORD_ID|6518 Cdc44p >gnl|BL_ORD_ID|6518 Rfc1p >gnl|BL_ORD_ID|6518 CDC44 [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|6518 RFC1 [Saccharomyces cerevisiae] Expect = 0.15534

  homologs in Genbank gbpln and gbbct alignment
  more homologs in NCBI nr alignment

 EST contigs
  no hit found
 EST clones
  no hit found

 reference
  

    last updated 2007/07/20
comment and suggestions to : yamada@nrib.go.jp