Aspergillus oryzae RIB 40 Genome DB

AO080525000055

 gene name
  
 product   Predicted protein
 CDS
  123 amino acids,   molecular mass 13867 Da show
  372 nucleotides show
  with 2000-b promoter, 1000-b terminator region and intorn
 show
 contig
  SC012 join(141498..141725, 141805..141948) genbank
 Dogan ID
  AO090005000589 histone deacetylase complex, SIN3 component [Aspergillus oryzae Ace36] alignment
 paralogs  none

 motif
 no hit found
 localization
  30.4 %: mitochondrial
  26.1 %: cytoplasmic
  17.4 %: Golgi
  8.7 %: endoplasmic reticulum
  4.3 %: extracellular, including cell wall
  4.3 %: vesicles of secretory system
  4.3 %: nuclear
  4.3 %: vacuolar
 		detail
 homologs  
  1
 AO090005000589 histone deacetylase complex, SIN3 component [Aspergillus oryzae Ace36] Expect = 0.16546
 alignment
  2
 ref|XP_001390708.1| unnamed protein product [Aspergillus niger] >gnl|BL_ORD_ID|5911 unnamed proteinproduct [Aspergillus niger] Expect = 8.5E-23
  3
 ref|XP_001481442.1| serine/threonine-protein kinase, putative [Aspergillus fumigatus Af293] >gnl|BLORD_ID|9000 serine/threonine-protein kinase, putative [Aspergillus fumigatus Af293] Expect = 3.80964
  4
 ref|XP_001270446.1| benzoate 4-monooxygenase cytochrome P450 [Aspergillus clavatus NRRL 1] >gnl|BL_RD_ID|2484 benzoate 4-monooxygenase cytochrome P450 [Aspergillus clavatus NRRL 1] Expect = 0.32086
  5
 ref|XP_001216367.1| conserved hypothetical protein [Aspergillus terreus NIH2624] >gnl|BL_ORD_ID|485 conserved hypothetical protein [Aspergillus terreus NIH2624] Expect = 0.03289
  6
 ref|XP_659150.1| hypothetical protein AN1546.2 [Aspergillus nidulans FGSC A4] >gnl|BL_ORD_ID|8853 hpothetical protein AN1546.2 [Aspergillus nidulans FGSC A4] Expect = 0.16137
  7
 ref|XP_957684.1| hypothetical protein [Neurospora crassa OR74A] >gnl|BL_ORD_ID|2141 hypothetical prtein [Neurospora crassa] Expect = 2.45443
  8
 gb|EAQ71240.1| hypothetical protein MGCH7_ch7g647 [Magnaporthe grisea 70-15] Expect = 2.1E-31
  9
 ref|NP_588413.1| hypothetical protein SPCC1739.05 [Schizosaccharomyces pombe 972h-] >gnl|BL_ORD_ID|787 SPCC1739.05 [Schizosaccharomyces pombe] Expect = 1.08685
  10
 ref|NP_013666.1| Pheromone-regulated protein, predicted to have 2 transmembrane segments; regulatedby Ste12p during mating [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|918 Pheromone-regulated membrane prtein 6 >gnl|BL_ORD_ID|918 unknown [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|918 YML047C [Saccharomyces erevisiae] Expect = 3.32002

  homologs in Genbank gbpln and gbbct alignment
  more homologs in NCBI nr alignment

 EST contigs
  no hit found
 EST clones
  no hit found

 reference
  

    last updated 2007/07/20
comment and suggestions to : yamada@nrib.go.jp