Aspergillus oryzae RIB 40 Genome DB

AO080536000083

 gene name
  
 product   Predicted protein
 CDS
  218 amino acids,   molecular mass 24643 Da show
  657 nucleotides show
  with 2000-b promoter, 1000-b terminator region and intorn
 show
 contig
  SC038 complement(join(1317378..1317391, 1317441..1318083)) genbank
 Dogan ID
  AO090038000495 geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Aspergillus oryzae Ace36] alignment
 paralogs  none

 motif
 no hit found detail
 localization
  65.2 %: cytoplasmic
  26.1 %: nuclear
  4.3 %: Golgi
  4.3 %: mitochondrial
 		detail
 homologs  
  1
 AO090038000495 geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase [Aspergillus oryzae Ace3] Expect = 0.0
 alignment
  2
 ref|XP_001397340.1| hypothetical protein An16g00260 [Aspergillus niger] >gnl|BL_ORD_ID|12574 unname protein product [Aspergillus niger] Expect = 0.0
  3
 ref|XP_750866.1| geranylgeranyl diphosphate synthase, putative [Aspergillus fumigatus Af293] >gnl|B_ORD_ID|801 geranylgeranyl diphosphate synthase, putative [Aspergillus fumigatus Af293] Expect = 6.1E-9
  4
 ref|XP_001273847.1| terpene synthase metal binding domain protein [Aspergillus clavatus NRRL 1] >gn|BL_ORD_ID|5773 terpene synthase metal binding domain protein [Aspergillus clavatus NRRL 1] Expect = 4.6E-11
  5
 pdb|2E4O|A Chain A, X-Ray Crystal Structure Of Aristolochene Synthase From Aspergillus Terreus And he Evolution Of Templates For The Cyclization Of Farnesyl Diphosphate >gnl|BL_ORD_ID|54 Chain B, X-Ra Crystal Structure Of Aristolochene Synthase From Aspergillus Terreus And The Evolution Of Templates For The Cyclization Of Farnesyl Diphosphate >gnl|BL_ORD_ID|54 Chain C, X-Ray Crystal Structure Of Aristolochene Synthase From Aspergillus Terreus And The Evolution Of Templates For The Cyclization Of Farnesyl Diphosphate >gnl|BL_ORD_ID|54 Chain D, X-Ray Crystal Structure Of Aristolochene Synthase From Aspergillus Terreus And The Evolution Of Templates For The Cyclization Of Farnesyl Diphosphate >gnl|BL_ORD_ID|54 Chain A, Aristolochene Synthase From Aspergillus Terreus Complexed With Pyrophosphate >gnl|BL_ORD_ID|54 Chain B, Aristolochene Synthase From Aspergillus Terreus Complexed With Pyrophosphate >gnl|BL_ORD_ID|54 Chain C, Aristolochene Synthase From Aspergillus Terreus Complexed With Pyrophosphate >gnl|BL_ORD_ID|54 Chain D, Aristolochene Synthase From Aspergillus Terreus Complexed With Pyrophosphate >gnl|BL_ORD_ID|54 aristolochene synthase [Aspergillus terreus] >gnl|BL_ORD_ID|54 aristolochene synthase [Aspergillus terreus] Expect = 1.7E-9
  6
 ref|XP_664414.1| hypothetical protein AN6810.2 [Aspergillus nidulans FGSC A4] >gnl|BL_ORD_ID|1509 hpothetical protein AN6810.2 [Aspergillus nidulans FGSC A4] Expect = 1.3E-43
  7
 ref|XP_959253.1| hypothetical protein [Neurospora crassa OR74A] >gnl|BL_ORD_ID|3159 predicted proten [Neurospora crassa] Expect = 4.40474
  8
 ref|XP_367595.2| hypothetical protein MGG_07506 [Magnaporthe grisea 70-15] >gnl|BL_ORD_ID|11294 hypthetical protein MGG_07506 [Magnaporthe grisea 70-15] Expect = 7.9E-8
  9
 ref|NP_594801.1| hypothetical protein SPAC1B3.16c [Schizosaccharomyces pombe 972h-] >gnl|BL_ORD_ID|92 Vitamin H transporter 1 (H(+)/biotin symporter vht1) >gnl|BL_ORD_ID|692 SPAC1B3.16c [Schizosaccharmyces pombe] >gnl|BL_ORD_ID|692 vitamin H transporter Vht1p [Schizosaccharomyces pombe] Expect = 2.38741
  10
 ref|NP_010004.1| Srb8p [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|726 Suppressor of RNA polymerase BSRB8 >gnl|BL_ORD_ID|726 DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit [Sacharomyces cerevisiae] Expect = 0.23366

  homologs in Genbank gbpln and gbbct alignment
  more homologs in NCBI nr alignment

 EST contigs
  no hit found
 EST clones
  no hit found

 reference
  

    last updated 2007/07/20
comment and suggestions to : yamada@nrib.go.jp