Aspergillus oryzae RIB 40 Genome DB

AO080537000027

 gene name
  
 product   Predicted protein
 CDS
  526 amino acids,   molecular mass 58739 Da show
  1581 nucleotides show
  with 2000-b promoter, 1000-b terminator region and intorn
 show
 contig
  SC102 complement(59521..61101) genbank
 Dogan ID
  AO090102000027 predicted protein [Aspergillus oryzae Ace36] alignment
 paralogs  none

 motif
 IPR001878 Zinc finger, CCHC-type
 detail
 localization
  73.9 %: nuclear
  8.7 %: cytoplasmic
  8.7 %: mitochondrial
  4.3 %: cytoskeletal
  4.3 %: peroxisomal
 		detail
 homologs  
  1
 AO090102000027 predicted protein [Aspergillus oryzae Ace36] Expect = 0.0
 alignment
  2
 ref|XP_001395700.1| hypothetical protein An12g06420 [Aspergillus niger] >gnl|BL_ORD_ID|9778 unnamedprotein product [Aspergillus niger] Expect = 4.3E-13
  3
 ref|XP_748802.1| zinc knuckle domain protein [Aspergillus fumigatus Af293] >gnl|BL_ORD_ID|3634 zincknuckle domain protein [Aspergillus fumigatus Af293] Expect = 7.1E-14
  4
 ref|XP_001270424.1| hypothetical protein ACLA_077450 [Aspergillus clavatus NRRL 1] >gnl|BL_ORD_ID|320 hypothetical protein ACLA_077450 [Aspergillus clavatus NRRL 1] Expect = 2.7E-20
  5
 ref|XP_001209517.1| conserved hypothetical protein [Aspergillus terreus NIH2624] >gnl|BL_ORD_ID|211 conserved hypothetical protein [Aspergillus terreus NIH2624] Expect = 2.4E-4
  6
 ref|XP_662715.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4] >gnl|BL_ORD_ID|5450 hpothetical protein AN5111.2 [Aspergillus nidulans FGSC A4] Expect = 9.2E-4
  7
 ref|XP_960605.1| hypothetical protein [Neurospora crassa OR74A] >gnl|BL_ORD_ID|2144 hypothetical prtein [Neurospora crassa] Expect = 1.3E-5
  8
 ref|XP_369516.2| hypothetical protein MGG_05948 [Magnaporthe grisea 70-15] >gnl|BL_ORD_ID|8579 hypohetical protein MGG_05948 [Magnaporthe grisea 70-15] Expect = 1.4E-5
  9
 ref|NP_595878.1| hypothetical protein SPBC1711.05 [Schizosaccharomyces pombe 972h-] >gnl|BL_ORD_ID|387 SPBC1711.05 [Schizosaccharomyces pombe] Expect = 0.08160
  10
 ref|NP_014144.1| Gis2p [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|5814 Zinc-finger protein GIS2 >gnlBL_ORD_ID|5814 unnamed protein product [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|5814 unnamed protein product [Sacharomyces cerevisiae] >gnl|BL_ORD_ID|5814 YNL255C [Saccharomyces cerevisiae] Expect = 0.00123

  homologs in Genbank gbpln and gbbct alignment
  more homologs in NCBI nr alignment

 EST contigs
  no hit found
 EST clones
  no hit found

 reference
  

    last updated 2007/07/20
comment and suggestions to : yamada@nrib.go.jp