Description about the protein product encoded by the gene
Sequence informations
Super contig which includes the gene
CDS ID of anothor A. oryzase DB, Dogan
paralogous and homologous CDS in the genome
Protein family, domain and others detected by InterProScan.
Localization of the product predicted by PSORT II.
Homologs in the genome of A. oryzae (Dogan), A. niger, A. fumigatus, A. clavatus, A. terreus, A. nidulans, N. crassa, M. grisea, S. pombe and S. cerevisiae
homologs found in Genbank plant (gbpln) and bacteria (gbbct) with experimental evidence
more homologs found in NCBI nr at 2007/05/16
Aspergillus oryzae
RIB 40 Genome DB
AO080545000001
gene name
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| product
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Predicted protein
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| CDS
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|
151
amino acids, molecular mass
15942
Da
|
show
|
|
456
nucleotides |
show |
with 2000-b
promoter, 1000-b
terminator region and intorn
|
show |
|
| contig
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|
SC110
|
join(2925..2940, 3003..3307, 3370..3504)
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genbank
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| Dogan ID
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| paralogs
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| motif
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| localization
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34.8 %: mitochondrial
26.1 %: cytoplasmic
13.0 %: endoplasmic reticulum
8.7 %: vacuolar
8.7 %: extracellular, including cell wall
8.7 %: nuclear
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detail
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| homologs
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| homologs in Genbank gbpln and gbbct
|
alignment
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EST contigs
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EST clones
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TH0320
TH0313
JZ8227
JZ6487
JZ3254
JZ2708
AN1069
AC1009
HG7303
JZ5067
and more... |
alignment
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|
last
updated 2007/07/20
comment
and suggestions to : yamada@nrib.go.jp