Aspergillus oryzae RIB 40 Genome DB

AO080546000019

 gene name
   tnpA
 product   Transposase and inactivated derivatives
 CDS
  326 amino acids,   molecular mass 37264 Da show
  981 nucleotides show
  with 2000-b promoter, 1000-b terminator region and intorn
 show
 contig
  SC110 complement(87508..88488) genbank
 Dogan ID
  AO090023000973 predicted protein [Aspergillus oryzae Ace36] alignment
 paralogs
 AO080554000193  AO080546000057 alignment

 motif
 no hit found
 localization
  52.2 %: nuclear
  21.7 %: cytoplasmic
  17.4 %: mitochondrial
  8.7 %: peroxisomal
 		detail
 homologs  
  1
 AO090023000973 predicted protein [Aspergillus oryzae Ace36] Expect = 0.0
 alignment
  2
 ref|XP_001395755.1| hypothetical protein An12g07000 [Aspergillus niger] >gnl|BL_ORD_ID|142 unnamed rotein product [Aspergillus oryzae] >gnl|BL_ORD_ID|142 unnamed protein product [Aspergillus oryzae] >gnl|L_ORD_ID|142 unnamed protein product [Aspergillus oryzae] >gnl|BL_ORD_ID|142 unnamed protein product [Aspergills niger] Expect = 0.0
  3
 ref|XP_752870.1| AMP binding domain protein, putative [Aspergillus fumigatus Af293] >gnl|BL_ORD_ID|072 AMP binding domain protein, putative [Aspergillus fumigatus Af293] Expect = 0.38135
  4
 ref|XP_001271034.1| hypothetical protein ACLA_038190 [Aspergillus clavatus NRRL 1] >gnl|BL_ORD_ID|292 hypothetical protein ACLA_038190 [Aspergillus clavatus NRRL 1] Expect = 2.6E-25
  5
 ref|XP_001218570.1| conserved hypothetical protein [Aspergillus terreus NIH2624] >gnl|BL_ORD_ID|81 onserved hypothetical protein [Aspergillus terreus NIH2624] Expect = 0.0
  6
 ref|XP_868919.1| hypothetical protein AN9537.2 [Aspergillus nidulans FGSC A4] >gnl|BL_ORD_ID|7528 hpothetical protein AN9537.2 [Aspergillus nidulans FGSC A4] Expect = 4.8E-7
  7
 ref|XP_962932.1| hypothetical protein [Neurospora crassa OR74A] >gnl|BL_ORD_ID|4993 hypothetical prtein [Neurospora crassa] Expect = 0.54739
  8
 ref|XP_001414156.1| hypothetical protein MGG_14049 [Magnaporthe grisea 70-15] >gnl|BL_ORD_ID|13100 ypothetical protein MGG_14049 [Magnaporthe grisea 70-15] Expect = 0.00125
  9
 ref|NP_588151.1| hypothetical protein SPCC338.17c [Schizosaccharomyces pombe 972h-] >gnl|BL_ORD_ID|964 Cohesin subunit rad21 (Double-strand-break repair protein rad21) (SCC1 homolog) >gnl|BL_ORD_ID|196 putative >gnl|BL_ORD_ID|1964 SPCC338.17c [Schizosaccharomyces pombe] Expect = 1.11064
  10
 ref|NP_011590.1| Mitochondrial ribosomal protein of the large subunit [Saccharomyces cerevisiae] >gl|BL_ORD_ID|538 Mitochondrial 54S ribosomal protein L25 (YmL25) >gnl|BL_ORD_ID|538 ribosomal protein [Saccharomyce cerevisiae] >gnl|BL_ORD_ID|538 MRPL25 [Saccharomyces cerevisiae] Expect = 3.52067

  homologs in Genbank gbpln and gbbct alignment
  more homologs in NCBI nr alignment

 EST contigs
  AoEST05859 alignment
 EST clones
  no hit found

 reference
   Tanaka,N., et al. , Novel transposon-like element (Aot1) and transposase-encoding gene (tnpA) of Aspergillus oryzae, Unpublished

    last updated 2007/07/20
comment and suggestions to : yamada@nrib.go.jp