Aspergillus oryzae RIB 40 Genome DB

AO080546000036

 gene name
  
 product   Predicted protein
 CDS
  109 amino acids,   molecular mass 12092 Da show
  330 nucleotides show
  with 2000-b promoter, 1000-b terminator region and intorn
 show
 contig
  SC110 join(124237..124264, 124419..124664, 124774..124795, 125121..125154) genbank
 Dogan ID
  AO090023000959 predicted protein [Aspergillus oryzae Ace36] alignment
 paralogs  none

 motif
 no hit found
 localization
  65.2 %: nuclear
  17.4 %: mitochondrial
  13.0 %: cytoplasmic
  4.3 %: peroxisomal
 		detail
 homologs  
  1
 AO090023000959 predicted protein [Aspergillus oryzae Ace36] Expect = 0.0
 alignment
  2
 ref|XP_001401428.1| hypothetical protein An04g00640 [Aspergillus niger] >gnl|BL_ORD_ID|3846 unnamedprotein product [Aspergillus niger] Expect = 2.8E-26
  3
 ref|XP_746817.1| LipA and NB-ARC domain protein [Aspergillus fumigatus Af293] >gnl|BL_ORD_ID|2763 LpA and NB-ARC domain protein [Aspergillus fumigatus Af293] Expect = 1.5E-6
  4
 ref|XP_001271416.1| F-box domain protein [Aspergillus clavatus NRRL 1] >gnl|BL_ORD_ID|3301 F-box doain protein [Aspergillus clavatus NRRL 1] Expect = 1.1E-11
  5
 ref|XP_001216415.1| predicted protein [Aspergillus terreus NIH2624] >gnl|BL_ORD_ID|2033 predicted potein [Aspergillus terreus NIH2624] Expect = 1.1E-7
  6
 ref|XP_661943.1| hypothetical protein AN4339.2 [Aspergillus nidulans FGSC A4] >gnl|BL_ORD_ID|8187 hpothetical protein AN4339.2 [Aspergillus nidulans FGSC A4] Expect = 6.0E-30
  7
 ref|XP_959231.1| hypothetical protein [Neurospora crassa OR74A] >gnl|BL_ORD_ID|9697 hypothetical prtein [Neurospora crassa] Expect = 6.4E-6
  8
 ref|XP_370325.2| hypothetical protein MGG_06822 [Magnaporthe grisea 70-15] >gnl|BL_ORD_ID|7929 hypohetical protein MGG_06822 [Magnaporthe grisea 70-15] Expect = 1.4E-8
  9
 ref|NP_594918.1| hypothetical protein SPAC14C4.13 [Schizosaccharomyces pombe 972h-] >gnl|BL_ORD_ID|48 Checkpoint protein rad17 >gnl|BL_ORD_ID|948 rad17 [Schizosaccharomyces pombe] >gnl|BL_ORD_ID|948 SAC14C4.13 [Schizosaccharomyces pombe] Expect = 1.78535
  10
 ref|NP_015243.1| Essential abundant protein involved in regulation of transcription, removes Spt15p(TBP) from DNA via its C-terminal ATPase activity, forms a complex with TBP that binds TATA DNA with hig affinity but with altered specificity [Saccharomyces cerevisiae] >gnl|BL_ORD_ID|3814 TATA-binding protein-associated factor MOT1 (TBP-associated factor MOT1) (Modifier of transcription 1) >gnl|BL_ORD_ID|3814 Mot1 >gnl|BL_ORD_ID|3814 LPF4c; Mot1p is a probable helicase essential for vegetative growth on rich glucose medium at 30 degree C: Swiss-Prot Accession number P32333; similar to S. cerevisiae RAD26 gene product: Swiss-Prot Accession number P40352 Expect = 0.37128

  homologs in Genbank gbpln and gbbct alignment
  more homologs in NCBI nr alignment

 EST contigs
  no hit found
 EST clones
  no hit found

 reference
  

    last updated 2007/07/20
comment and suggestions to : yamada@nrib.go.jp